Programmes to view or analyze properties of small molecules or proteins. Some sites offer physical models.
Related categories 1
Sites 23
Loading new listings for you to review...
- Historical Molecular Graphics Digitized versions of 16mm movies of molecular structures produced in the early days of interactive molecular graphics.
- OpenRasMol Provided for the convenience of users and software developers of open source versions of RasMol.
- VMD A free program for visualization and analysis of biological systems such as proteins, nucleic acids, and lipid bilayer assemblies.
- Molymod Molecular Models Plastic molecular models for use in chemistry, biochemistry, molecular biology (DNA double helix), semiconductors and crystal lattice structures.
- Labquip Plastic molecular models for constructing polypeptides and DNA molecules.
- Biodesigner and iMol A molecular viewer for Windows9x systems with sequence editor and protein builder. Free for academic use. Additionaly the iMol molecule viewer is available for Mac OS X systems.
- RasMol Molecular visualization freeware for proteins, DNA, and macromolecules. Freely available for Windows, Macintosh, and UNIX.
- Jmol Open source molecule viewer written in Java. It runs as a standalone application and as a web browser applet.
- Viewmol An open-source graphical front end for computational chemistry programs such as Gaussian, Gamess, and Mopac. Available for Linux, FreeBSD, Mac OS X, and other Unices.
- SweetMollyGrace A suite of freeware tools for automating work of rendering and animating molecules. Generates high quality images of molecules from PDB, XYZ, or molfiles using raytracing tools (Povray and Raster3D).
- ChemCraft Windows-based program for visualization of molecular structures, vibrational modes, molecular orbitals, energy gradient and other properties from log files produced by the GAMESS and Gaussian packages.
- MOLDEN Pre- and post-processing program for molecular and electronic structure, with Z-matrix editor, electron density visualization, and molecule animations. Available for Unix and VMS; free for academic use.
- Protein Explorer A web-based viewer for the 3D structures of proteins, DNA and RNA. Requires Netscape and the Chime plugin, which is only available for Windows9x.
- Facio 3D-Molecular Modeling Software, available at no charge for the Windows platform. Has functions for visualization of biomolecules and results from GAMESS QM calculations, and for aligning and modifying structures.
- UCSF Chimera Highly extensible, interactive molecular graphics program. It is the successor to UCSF Midas and MidasPlus. Free of charge for academic, government, non-profit, and personal use.
- PyMolWiki User-contributed wiki to supplement the PyMOL documentation.
- Nanotube Modeler A program for generating and visualizing the xyz-coordinates for nanotubes, nanocones, nanosheets, and fullerenes. For Windows; free demo version available.
- CueMol Free molecular structure visualization and rendering program for Windows.
- Santorini and Patmos, Molecular Viewer and Screensaver Read XYZ or PDB files of atoms and display them in a 3-dimensional view on Windows PCs.
- Review of Molecular Modelling Programs Reviews, screenshots, and table of features comparing over a dozen freely available molecular modelling and viewing programs.
- Jamberoo: Cross Platform Molecular Editor Free cross-platform application for displaying, analyzing, editing, converting and animating molecular systems.
- Avogadro Open source advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science and related areas. It offers flexible rendering and a powerful plugin architecture.
- PyMOL A free and flexible molecular graphics and modelling package which can be also used to generate animated sequences.